Additional file 5

List of the differentially expressed genes (|log2(fold change)|> 0.5 and p.adj value < 0.05) during the two weeks following weaning (D35 vs D49) in ileum of rabbit that had no access to faeces ingestion in early life in the nest (NF group : No Faeces ingestion).

Associated.Transcript.Name

Ensembl.Gene.ID

Human.Ensembl.Gene.ID

logFC

adj.P.Val

ProbeName

Sequence

RFC3

ENSOCUG00000003624

ENSG00000133119

-0.7738583

0.03447196

CUST_6894_PI427147524

GTGTCAGCATTTACATGCCGTTTGTATGGGGATAGCCCCAGGTAAAATAAAATAACTTTA

GRIP1

ENSOCUG00000014011

ENSG00000155974

-0.6148131

0.03447196

CUST_9581_PI427147524

CATGGGTATTTATCGTCTATGTATGGTTTTGGGGGAATCAAAATTGTTGCAAATATTTGG

HAPLN1

ENSOCUG00000002630

ENSG00000145681

-0.5232365

0.03447196

CUST_6759_PI427147524

CTAGCTGGTGTGCTTTCCTGAATGTTTTATGTAGATTTTCCTCCCATAAACATGAGTAAA

PFKFB4

ENSOCUG00000006196

ENSG00000114268

0.5449297

0.04446088

A_04_P046207

ATTGATGCGGGTGTCTGTGAGGAGATGACCTACGAGGAAATTCAAGATCATTATCCACTG

TNNC1

ENSOCUG00000007983

ENSG00000114854

0.7194467

0.01056407

A_04_P029036

TACGACGAGTTCCTGGAATTCATGAAGGGTGTGGAATAGACCCAGCCTTCAGCGGGAGCC

THRSP

ENSOCUG00000000957

ENSG00000151365

0.7751950

0.03447196

A_04_P032677

TATCCTCACCCACCTCACTCTGAAAGCCCAGGAGGTGACAAGGAAATACCAGGAAATGAC

AQP4

ENSOCUG00000008833

ENSG00000171885

1.1455312

0.01056407

A_04_P004256

ACCTGATTCTAAAACCAGGAGTGATGCATGTGATTGACATTGACCGAGGAGAGGAGAAGA

LPL

ENSOCUG00000008236

ENSG00000175445

1.2317677

0.03340895

CUST_109_PI427147524

GAAATGCCACGACAAGTCTCTGAACAACAAGTCAGGCTGAAACTGAGAAAATCTACAGGC

FABP4

ENSOCUG00000015483

ENSG00000170323

1.9290767

0.03447196

CUST_195_PI427147524

AGAATTTATGAAAGAGCATAAGCCCGGGGACACTGAGCTGGACTGAAGTTTGCATTGAAT

HERC5

ENSOCUG00000015872

ENSG00000138646

2.1210574

0.03719102

CUST_747_PI428255556

TGAAAATAACATTCTGCTGTCCTGACAATTTGAGTGAGAAAGACCCCATGCGAGCGCAGA