Additional file 6

List of the differentially expressed genes (|log2(fold change)|> 0.5 and p.adj value < 0.05) during the two weeks following weaning (D35 vs D49) in the ileum of rabbit that ingested feces from unrelated does treated with antibiotic (FFab group : ingestion of Faeces from Foreign antibiotic treated females) in the nest during early life.

Associated.Transcript.Name

Ensembl.Gene.ID

logFC

adj.P.Val

ProbeName

Sequence

Human.Ensembl.Gene.ID

MYC

0

-0.6045121

0.0274154674

CUST_4767_PI427147524

ACTGTAAGGTTTAGCCATAAAGTAAACTGCCTCAAATGGGACTTTGGGCATAAAATAACT

NFKBIE

ENSOCUG00000017894

0.5663467

0.0004823007

A_04_P060592

ACTCTGTTGCCCTTTGATGACCTCAAGATCTCAGGGAAGCCGCTGCTGTGTGCTGACTGA

ENSG00000146232

TNNC1

ENSOCUG00000007983

0.7665820

0.0011655986

A_04_P029036

TACGACGAGTTCCTGGAATTCATGAAGGGTGTGGAATAGACCCAGCCTTCAGCGGGAGCC

ENSG00000114854

ALDOC

ENSOCUG00000013802

0.7831414

0.0274154674

A_04_P085417

AGTTCATCAAGCGGGCTGAGGTGAATGGTCTTGCAGCCCAGGGGAAGTATGAAGGCAGTG

ENSG00000109107

TNFSF13

ENSOCUG00000028216

0.8844046

0.0262032635

A_04_P001584

AGTGCCGCGCCAGCCTTTGACGTAGTGGACATTAAAGAGCTAGAATGTCTTGCTTTTAAA

THRSP

ENSOCUG00000000957

0.8987985

0.0078052139

A_04_P032677

TATCCTCACCCACCTCACTCTGAAAGCCCAGGAGGTGACAAGGAAATACCAGGAAATGAC

ENSG00000151365

IDO2

ENSOCUG00000003349

0.9683482

0.0480063596

A_04_P070797

TCTTTATAGGCCGTGGATGGAAATCGCCAACAAGCTTGCACACTTAATTGAGAGTCACCA

ENSG00000188676

AKR1C1L

ENSOCUG00000005825

1.0575431

0.0182242816

A_04_P046639

TAATATAGCTCTTGTGGCCTATTTTGCTTTGGGAGCCCAACGAGATACATGGATGGACCA

ENSG00000196139

AQP4

ENSOCUG00000008833

1.4275259

0.0000393397

A_04_P004256

ACCTGATTCTAAAACCAGGAGTGATGCATGTGATTGACATTGACCGAGGAGAGGAGAAGA

ENSG00000171885